Wednesday, April 16, 2014

Factor V Leiden


Factor V Leiden-  Hereditary Hypercoagulability
  • Hypercoagulability: excessive blood clot formation
  • Factor V Leiden: a mutation in Factor V protein
    • Factor V is pro-coagulation protein
    • When activated Factor V acts as a co-factor in activation of protombin to thrombin by factor Xa 
    • Factor V is inactivated by activated protein C
  • Type of mutation: missense mutation  G->A [ arginine -> glutamine]
    • this mutation disable inactivation of Factor V by protein C
      • this leads to excessive fibrin clots
  • Diagnosis: PCR-RFLP (PCR of fragment gene followed with restriction of the product)
    • Normal: Factor V gene has two restriction site by MnlI
                             ____67____|___37___|______163______
      • three fragments are produced (163, 67, 37 bp)
    • Mutant: Factor V gene has one restriction site by MnlI (the mutation destroys the second restriction site for MnlI endonuclease enzyme)
      • two fragments are produced (200, 67 bp)
                           _____67____|_________200____________
    • The fragments then run on a gel

Fragile X Syndrome (trinucleotide repeat disorder)


  • Genomic location of mutation: Xq27.3
  • Type of mutation: trinucleotide repeat of CGG
    • Normal range of the repeats: 6-50
    • Intermediate number: 50-199 possess a premutation
    • Fragile X repeats: >200 
  • Diagnosis: screening with PCR followed by Southern blot
    • PCR is not efficient with hight number of CGG repeats
  • Prognoses: The large the number of the CGG repeats the earlier the onset of symptoms; more severe symptoms
  • Mode of the mutations: the CGG repeats become methylated at the C nucleotide; methylation silences the gene
    • a carrier is phenotypical normal in part because of the lack of FMR1 methylation


Quiz: Detection and Identification of Microorganisms

by mona1nyc

Friday, April 4, 2014

Quiz: DNA Polymorphisms and Human Identification

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by mona1nyc